How about the same with speakers?
You can't really make one speaker sound like another in the same way since you have physical characteristics like dispersion, ported/sealed, driver excursion etc which introduce limitations that aren't possible to 'undo' in the same way that frequency response is.
However, the same guy that did 'AutoEQ' also created a tool called 'Impulcifier' which measures the in-room response of a set of speakers with binaural mics, and then uses that to reproduce the sound of the system over headphones. You can do up to a 7-channel surround rig. This has been done before - it's basically the same idea as the Smyth Realizer, but Impulcifier is free. I've done some experiments with it, and it's fairly impressive from what I can hear so far. I need to get back to it and do some more critical listening comparisons.
Impulcifier actually includes a headphone-response measurement step as part of the process, which in theory eliminates the headphone response as a variable, although so far I've gotten much better results with my Nad Viso HP50 than with my Senn HD6XX - one of the things I need to investigate.