PEQ settings was addressed months ago, and there was nothing about the issue you've cited that would have destroyed your speakers.
What do you mean by, "the way Topping handles these situations"? They handle the situation by fixing the problem, which they do when they are informed of a problem.
That's not their "modus operandi." Not all bugs are going to be evident to them.
The gain setting is only applicable to the HPA outputs (page 13 in the manual):
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It seems that you may not "know" Topping as well as you think.