This needs to be divided into several questions.
1) Do we use artificial reverberation in producing, mixing, etc?
2) Do we use it in a home listening environment.
The answer to 1 is yes, yes, and yes, and yes some more.The whole "natural vs. unnatural" thing is somewhat of a misnomer, when you use an actual room response (or a good synthetic one), but that's on the artistic side. I'm somewhat limited in what I can say about that, but there are many options, and many ways to go about that, including in our production tools.
To 2, we generally learn our home environment. Since we know it, we learn how to "hear through" it, unless it's really, really bad. So adding anything else adds a new task for the listener until the listener adjusts. I do have some issues with the comments in the paper, in particular the "generally linear", that's true only in a room with no air movement, but the effects are not extreme in a listening room. In a concert hall, they are quite noticeable, which is evident by just capturing half a dozen impulse responses with the same exact locations for source and mike(s).
Synthetic reverbs can be natural sounding, or not, but if you're adding it at the listening room end, and comparing it to the room the person is used to, that's kind of an odd idea.
In a few very special cases, some short-period natural-sounding reverb might be added by systems that are doing 2-loudspeaker virtualization, this in order to provide front/back cues, but that's not a normal audiophile environment, and I wouldn't generally advocate that it should be.