Having stumbled upon the change log of the MA 1 software, I take back what I said about single point measurements having better stereo imaging. Apparently, Neumann made some technical changes with regards to alignments a couple of versions ago which is probably why it improved the stereo imaging after I updated the MA1 software to the latest version. I calibrated again with multi-point measurements and the stereo imaging is even better than single point. The resulting corrected graph is more linear and it sounds more balanced accordingly.
It's also good that they finally fixed the networking issue that prevented MA1 from detecting the speakers and subs when the switch is connected to the onboard LAN port of my PC. I don't have to use my MacBook anymore to perform alignments which is additional clutter to the already cluttered setup of having a network switch and audio interface. An area where Genelec GLM is better in terms of having a more streamlined room correction setup.