Following this protocol from Keith_W:
The crossover is in place at 80hz with a surround speaker as timing reference. When sweeping L+R (with sub on and crossover active) Inverted polarity gave higher SPL at the crossover frequency of 80hz, so I chose inverted polarity, as shown in figure 'sub_polarity.jpg'.
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Here (phase-overlay-7.9ms-delay-LRsub.jpg) is the phase vs. frequency overlay for three separate sweeps: 1) L+R together without sub (blue), 2) subwoofer only with no delay (red), and 3) subwoofer only with 7.9ms delay (green). You can see that the phase of L+R is aligned with the sub when sub is delayed by 7.9ms at the 80hz crossover point.
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Also shown is the alignment tool with L+R together without sub (blue) and the subwoofer only with 7.9ms delay (green), both the phase view and the impulse view.
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Next, for the verification step, I made 'aligned copy' for L+R together without sub, and separately sub with 7.9ms delay, and then took the vector average (blue). I then took a new measurement of "L+R", which because of the active crossover also plays the subwoofer with 7.9ms delay (red), showing both SPL and unwrapped phase.
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It would appear the graph shows the vector average does not align with the measurement at 80hz. I think what this may mean is that when L,R, and sub sweep together (red) there is interaction among the 3 speakers that cannot be accounted for when L+R (no sub) and subwoofer are swept separately and then vector averaged. (Possibly more on that in a future post...) Based on the phase overlay and alignment tool views, it looks like I have successfully aligned L+R and subwoofer with 7.9ms delay, but would like comments here as I'm not sure given potential trouble in this verification step.