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I think you are mis-reading this graph. This is displaying the difference in the spectrum. Mostly there is 0 db difference. There is a spike of difference and then one filter attenuates lower past 20 khz than the other. So that isn't a noise floor, but a noise floor difference. Swapping the two files in Deltawave gives you this.? The spike has 40 dB amplitude over the noise floor.
Looking at the spectrum in the other window shows while the difference is large the actual level of the spike is still very low.
Here you see the difference in the matched spectrum, and where the spike in difference occurs it is nevertheless around or below -100 db.
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