This can be due to multiple factors, including the CD, drive and EAC settings. I've had one external drive and always had problems on certain CDs with 3-5 tracks - only at the very end of each track. I then got a second external drive I specifically selected based on the
AccurateRip drive accuracy database. That drive (accuracy >99.7%) also had occasional problems, but they were much less common. Still, based on the AccurateRip DB, there should be not problems at all with the second drive.
I then discovered, that the first drive works much, much better with the EAC setting "Fill up offset missing samples with silence" active, as well as "Overread lead-in/lead-out" and "Drive buffers audio data" unchecked. It still has an occasional problem on a single track on 1 in 25 or so CDs. The second drive works flawlessly using those settings, with each and every disc I have ripped until now. I suggest having a look at those settings, as it may not be a disc problem.