Ah, now I get it.
First of all, your recording levels seem awfully low. -80 dBFS is barely anything.
That -80dB was without anything playing... on an unused input.
It was ~-50dB when it had the bad USB noise, on an unused input.
I am about -45dB on on phono, and there is a nasty hum.
How much higher does preamp volume go, does it stop at 0 dB or can it go to +16 dB or even higher? (Which model preamp is this anyway?)
If I turn up the preamp to -5dB then the RME's bar display shows it loading close to full-scale (closer towards clipping_
Preamp is a Nagra Jazz, and there is no dedicated line level out for a tape deck. (Which is funny if we thing about that.)
It does also have a +12dB switch.
The ADI-2 Pro has four different input sensitivity settings, ranging from +4 dBu all the way to +24 dBu. For recording consumer-level analog sources, I'd start out with the lowest setting and see whether you're anywhere near clipping. I'd generally expect peak levels of about -10 to -20 dBFS on vinyl... substantially more than what you've found so far in any case.
I set etc reference level to +4 on the analogue inputs.
When I run the preamp at -0dB I d get up there, so I just turn off the speaker amp.
On the RME Main 1/2 output it says reference is +24dB, but I cannot click on the right kets to lower that to +4 dB.
Regarding the interference, I would suggest unplugging everything from the preamp that isn't absolutely necessary for recording. If that doesn't cut it, please give us a list of the entire signal chain ahead of the ADI-2 Pro input (devices and how they're powered).
AC --> transformer ---> power strip
Powerstrip --> Nagra MPS --> Phono amp
Powerstrip --> Nagra MPS --> preamp
Powerstrip --> Mac Wall wart --> computer
Powerstrip --> RME SMPS --> RME (I am suspicious of this SMPS)
Powerstrip --> Speaker amp
Powerstrip --> Phono wart --> Phono
Powerstrip --> Mac Charger --> Mac
MacBookPro connected to RME via USB.
I suppose I can get a Lemo connector to replace the Phono wall wart, but I also have a new unit headed my way for that.
The 30dB cut to the USB noise seemed to happen with connecting the RME's XLR outputs to the preamp's XLR inputs.
My hypothesis was that make it need to be grounded to the preamp better... and I put together a 1 foot pair of XLRs and the shield is a lot of copper connected to pin-1.
Since it went way down, I think that the hypothesis was good, (Or something else happened and I got lucky,)
However there does seem to be a hefty increase in 50Hz AC hum, and a bit of increase on higher frequency noise.
I can hear the high freq noise if I tweeter whisper, but I need to rail the volume up to hear it, and with the AC on... except on the phono stage which was previously quiet.
So I guess now I am left with the addition of phono hum. I'll add a ground wire between the phono and preamp.
I cannot seem to attach a wav file...?
And I cannot find the output reference level setting.