Just watched a video with Jeff Clark, meant to be lead systems engineer at Audyssey and he's been working on it since 2005 so I'm guessing he knows how the system works. Here's what he says.I have calibrated rooms countless times by hand and with every Room EQ system out there. I understand the underlying science and what the system needs to do. It is not a mistake that I quickly arrived at the right target curve and positive results.
"Don't hand hold the microphone" (its something to do with timing precision) "There are other systems where you can, ours uses that repeated chirp to cancel the background noise and in order to do that it needs to be perfectly still"
I'm not saying you didn't get excellent results but your environment may be a lot quieter than another persons, mine for instance, my lounge is about 3mtrs from a busy A road, even on a Sunday there's constant traffic, luckily its 30mph through the village. I just wanted to point out that for someone who strives for accuracy and the best engineering possible, holding the mic, according to Jeff, isn't the BEST way to do it, well he just says don't do it. I think it should be noted that holding the mic is probably ok but depends on background noise, I only bring this up because you totally convinced me to hold my mic next time i do some measuring but the video has convinced me otherwise. Here's the video, 40.25 is when he talks about holding the mic.